org.fhcrc.cpl.viewer.ms2
Class Fractionation2DUtilities.FractionatedAMTDatabaseStructure

java.lang.Object
  org.fhcrc.cpl.viewer.ms2.Fractionation2DUtilities.FractionatedAMTDatabaseStructure

Enclosing class:

Fractionation2DUtilities

public static class Fractionation2DUtilities.FractionatedAMTDatabaseStructure
extends java.lang.Object

Describes the structure of an AMT database containing one or more fractionated experiments

Field Summary

protected java.util.List<java.lang.Integer>	beginningIndicesForExperiments
protected java.util.List<Fractionation2DUtilities.FractionatedExperimentStructure>	experimentStructures

Constructor Summary

Fractionation2DUtilities.FractionatedAMTDatabaseStructure()

Fractionation2DUtilities.FractionatedAMTDatabaseStructure(Fractionation2DUtilities.FractionatedExperimentStructure experimentStructure, int numExperiments)

Fractionation2DUtilities.FractionatedAMTDatabaseStructure(java.util.List<Fractionation2DUtilities.FractionatedExperimentStructure> experimentStructures)

Method Summary

void	addExperimentStructure(Fractionation2DUtilities.FractionatedExperimentStructure experimentStructure)
Pair<java.lang.Integer,int[]>	calculateExperimentAndPosition(int index) experiment number is zero-based
Fractionation2DUtilities.FractionatedExperimentStructure	getExperimentStructure(int experimentNumber)
int	getNumExperiments()
int	getNumFractions()
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

experimentStructures

protected java.util.List<Fractionation2DUtilities.FractionatedExperimentStructure> experimentStructures

beginningIndicesForExperiments

protected java.util.List<java.lang.Integer> beginningIndicesForExperiments

Constructor Detail

Fractionation2DUtilities.FractionatedAMTDatabaseStructure

public Fractionation2DUtilities.FractionatedAMTDatabaseStructure()

Fractionation2DUtilities.FractionatedAMTDatabaseStructure

public Fractionation2DUtilities.FractionatedAMTDatabaseStructure(java.util.List<Fractionation2DUtilities.FractionatedExperimentStructure> experimentStructures)

Fractionation2DUtilities.FractionatedAMTDatabaseStructure

public Fractionation2DUtilities.FractionatedAMTDatabaseStructure(Fractionation2DUtilities.FractionatedExperimentStructure experimentStructure,
                                                                 int numExperiments)

Method Detail

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

addExperimentStructure

public void addExperimentStructure(Fractionation2DUtilities.FractionatedExperimentStructure experimentStructure)

getExperimentStructure

public Fractionation2DUtilities.FractionatedExperimentStructure getExperimentStructure(int experimentNumber)

getNumFractions

public int getNumFractions()

calculateExperimentAndPosition

public Pair<java.lang.Integer,int[]> calculateExperimentAndPosition(int index)

experiment number is zero-based

Parameters:

index -

Returns:

getNumExperiments

public int getNumExperiments()