org.fhcrc.cpl.viewer.mrm
Class TransitionDefinition

java.lang.Object
  org.fhcrc.cpl.viewer.mrm.TransitionDefinition

public class TransitionDefinition
extends java.lang.Object

Created by IntelliJ IDEA. User: tholzman Date: Dec 12, 2007 Time: 11:54:29 AM To change this template use File | Settings | File Templates.

Nested Class Summary

static class

TransitionDefinition.TransitionDefinitionPeptideMZAscComparator

Field Summary

protected int	AQUAcode
protected MRMDaughter	associatedProduct
protected char	lowOrHigh
protected java.lang.String	peptide
protected float	peptideMZ
protected float	productMZ

Constructor Summary

TransitionDefinition(java.lang.String peptide, float peptideMZ, float productMZ)

TransitionDefinition(java.lang.String peptide, float peptideMZ, float productMZ, char lowOrHigh, int AQUAcode)

Method Summary

int	getAQUAcode()
MRMDaughter	getAssociatedProduct()
char	getLowOrHigh()
java.lang.String	getPeptide()
float	getPeptideMZ()
float	getProductMZ()
boolean	isHigh()
boolean	isLow()
void	setAQUAcode(int AQUAcode)
void	setAssociatedProduct(MRMDaughter associatedProduct)
void	setLowOrHigh(char lowOrHigh)
void	setPeptide(java.lang.String peptide)
void	setPeptideMZ(float peptideMZ)
void	setProductMZ(float productMZ)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

peptide

protected java.lang.String peptide

peptideMZ

protected float peptideMZ

productMZ

protected float productMZ

lowOrHigh

protected char lowOrHigh

AQUAcode

protected int AQUAcode

associatedProduct

protected MRMDaughter associatedProduct

Constructor Detail

TransitionDefinition

public TransitionDefinition(java.lang.String peptide,
                            float peptideMZ,
                            float productMZ)

TransitionDefinition

public TransitionDefinition(java.lang.String peptide,
                            float peptideMZ,
                            float productMZ,
                            char lowOrHigh,
                            int AQUAcode)

Method Detail

getPeptide

public java.lang.String getPeptide()

setPeptide

public void setPeptide(java.lang.String peptide)

getPeptideMZ

public float getPeptideMZ()

setPeptideMZ

public void setPeptideMZ(float peptideMZ)

getProductMZ

public float getProductMZ()

setProductMZ

public void setProductMZ(float productMZ)

getLowOrHigh

public char getLowOrHigh()

setLowOrHigh

public void setLowOrHigh(char lowOrHigh)

isLow

public boolean isLow()

isHigh

public boolean isHigh()

getAQUAcode

public int getAQUAcode()

setAQUAcode

public void setAQUAcode(int AQUAcode)

getAssociatedProduct

public MRMDaughter getAssociatedProduct()

setAssociatedProduct

public void setAssociatedProduct(MRMDaughter associatedProduct)