org.fhcrc.cpl.viewer.feature
Class FeatureStrategyWavelet2D

java.lang.Object
  org.fhcrc.cpl.viewer.feature.FeatureExtractor
      org.fhcrc.cpl.viewer.feature.FeatureStrategyUsingWindow
          org.fhcrc.cpl.viewer.feature.FeatureStrategyUsingWindow2D
              org.fhcrc.cpl.viewer.feature.FeatureStrategyWavelet2D

public class FeatureStrategyWavelet2D
extends FeatureStrategyUsingWindow2D

Created by IntelliJ IDEA. User: mbellew Date: Oct 12, 2004 Time: 9:23:52 PM To change this template use File | Settings | File Templates.

Nested Class Summary

static class

FeatureStrategyWavelet2D.SmoothWavelet

Nested classes/interfaces inherited from class org.fhcrc.cpl.viewer.feature.FeatureExtractor

FeatureExtractor.StatusListener

Field Summary

Fields inherited from class org.fhcrc.cpl.viewer.feature.FeatureStrategyUsingWindow

_noise

Fields inherited from class org.fhcrc.cpl.viewer.feature.FeatureExtractor

_dumpWindowSize, _maxCharge, _mzRange, _run, _scanCount, _sn, _startScan, _status, DEFAULT_EXTRACTOR_PROPERTYNAME, TYPE_1D, TYPE_2D

Constructor Summary

FeatureStrategyWavelet2D(MSRun run, int scan, int count, int maxCharge, FloatRange range, double sn)

Method Summary

Spectrum.Peak[]

ExtractPeaks(Scan[] scans, Spectrum.Peak[] grossFeatures)

Methods inherited from class org.fhcrc.cpl.viewer.feature.FeatureStrategyUsingWindow2D

_analyze, analyze2D, ExtractPeaks, FilterPeakSet, getType, InterestingFeatures

Methods inherited from class org.fhcrc.cpl.viewer.feature.FeatureStrategyUsingWindow

_logDebug, _pickPeaks, _smooth, analyze1D, ExtractPeptideFeatures, ScoreFeature

Methods inherited from class org.fhcrc.cpl.viewer.feature.FeatureExtractor

analyze, analyzeScanAtATime, analyzeWindow, CombineScans, getAccurateMassAdjustmentScans, getDefault, getDefaultClass, getDumpWindowSize, getMzExtractionRange, getMzExtractionRange, getScans, setAccurateMassAdjustmentScans, setDefault, setDumpWindowSize, setStatusListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FeatureStrategyWavelet2D

public FeatureStrategyWavelet2D(MSRun run,
                                int scan,
                                int count,
                                int maxCharge,
                                FloatRange range,
                                double sn)

Method Detail

ExtractPeaks

public Spectrum.Peak[] ExtractPeaks(Scan[] scans,
                                    Spectrum.Peak[] grossFeatures)