org.fhcrc.cpl.viewer.commandline.modules
Classes 
BaseCommandLineModuleImpl
CalibrateFeatureMassesCLM
CalibrateMzxmlMassesCLM
ConsensusFeatureFileCLM
ConvertFeatureFileCommandLineModule
CreateIndexCommandLineModule
DeconvoluteCommandLineModule
DetectAdductsCLM
DumpWindow2DCommandLineModule
FeatureSelectionParamsCommandLineModule
FeatureSetMatcherCommandLineModule
FilterFeaturesCommandLineModule
FindPeptidesCommandLineModule
HydrophobicityAlgorithmAnalyzerCLM
MassAccuracyCommandLineModule
PeptidePeakModellerCLM
PeptideQuantVisualizationCLM
PlotFeatureAttributesCLM
PlotMassCalibrationCLM
PlotMs1Ms2ScanCountsCLM
RunCommandFileCommandLineModule
SaveImageCommandLineModule
SaveMzxmlWindowCommandLineModule
SpreadsheetMergeCLM
UserManualCLM
ViewSpectrumChartCLM