org.fhcrc.cpl.viewer.amt
Interfaces 
AmtFeatureSetMatcher
Classes 
AcrylamideHydrophobicityAdjuster
AmtDatabase
AmtDatabaseBuilder
AmtDatabaseFeatureSetGenerator
AmtDatabaseManager
AmtDatabaseMatcher
AmtDatabaseMatcher.PeptideProphetComparatorDesc
AmtFeatureSetMatcher.FeatureMatchingResult
AmtFeatureSetMatcherFactory
AMTFileRestrictor
AmtLabeledQuant
AmtMatchedProtein
AmtMatchedProtein.AmtMatchedPeptide
AmtMatchProbabilityAssigner
AmtPeptideEntry
AmtPeptideEntry.AmtPeptideModificationStateEntry
AmtPeptideEntry.AmtPeptideObservation
AmtRunEntry
AmtTsvReader
AmtTsvReader.AmtTsvRow
AmtUtilities
AmtXmlReader
AmtXmlWriter
BaseAmtFeatureSetMatcherImpl
ClusteringFeatureSetMatcher
HydrophobicityNormalizer
PeptideMatcher
ProteinDisplay
ProteinMatcher
RecursiveFeatureSetMatcher
Window2DFeatureSetMatcher