org.fhcrc.cpl.viewer.amt
Class AmtFeatureSetMatcherFactory

java.lang.Object
  org.fhcrc.cpl.viewer.amt.AmtFeatureSetMatcherFactory

public class AmtFeatureSetMatcherFactory
extends java.lang.Object

Creates instances of particular FeatureSetMatchers

Field Summary

static java.lang.String

AMT_PACKAGE

Constructor Summary

AmtFeatureSetMatcherFactory()

Method Summary

static AmtFeatureSetMatcher	createInstance(java.lang.Class classToInstantiate) Catch different kinds of exceptions and throw InstantiationExceptions, because I'm lazy farther up in the code
static AmtFeatureSetMatcher	createInstance(java.lang.Class classToInstantiate, float deltaMass, int deltaMassType, float deltaHydrophobicity) Instantiate the class and then call the init() method
static AmtFeatureSetMatcher	createInstanceFromPartialClassName(java.lang.String partialClassName) Given a partial class name, tacks on "FeatureSetMatcher", puts it in the right package, and looks for it.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

AMT_PACKAGE

public static final java.lang.String AMT_PACKAGE

See Also:

Constant Field Values

Constructor Detail

AmtFeatureSetMatcherFactory

public AmtFeatureSetMatcherFactory()

Method Detail

createInstanceFromPartialClassName

public static AmtFeatureSetMatcher createInstanceFromPartialClassName(java.lang.String partialClassName)
                                                               throws java.lang.InstantiationException

Given a partial class name, tacks on "FeatureSetMatcher", puts it in the right package, and looks for it. This method is not forgiving. Capitalization matters, etc.

Parameters:

partialClassName -

Returns:

Throws:

java.lang.InstantiationException

createInstance

public static AmtFeatureSetMatcher createInstance(java.lang.Class classToInstantiate)
                                           throws java.lang.InstantiationException

Catch different kinds of exceptions and throw InstantiationExceptions, because I'm lazy farther up in the code

Parameters:

classToInstantiate -

Returns:

Throws:

java.lang.InstantiationException

createInstance

public static AmtFeatureSetMatcher createInstance(java.lang.Class classToInstantiate,
                                                  float deltaMass,
                                                  int deltaMassType,
                                                  float deltaHydrophobicity)
                                           throws java.lang.InstantiationException

Instantiate the class and then call the init() method

Parameters:

classToInstantiate -

deltaMass -

deltaMassType -

deltaHydrophobicity -

Returns:

Throws:

java.lang.InstantiationException