org.fhcrc.cpl.toolbox.proteomics.feature.filehandler
Class BaseFeatureSetFileHandler

java.lang.Object
  org.fhcrc.cpl.toolbox.proteomics.feature.filehandler.BaseFeatureSetFileHandler

Direct Known Subclasses:

APMLFeatureFileHandler, HardklorFeatureFileHandler, NativeTSVFeatureFileHandler, PepXMLFeatureFileHandler

public abstract class BaseFeatureSetFileHandler
extends java.lang.Object

base class for featurefile handlers

Field Summary

boolean	dumpWindow
static java.lang.String	FILE_TYPE_NAME

Constructor Summary

BaseFeatureSetFileHandler()

Method Summary

java.lang.String	getFileTypeName() Return a string identifying this type of file
static boolean	isXMLFile(java.io.File inputFile)
void	setDumpWindow(boolean dumpWindow)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

FILE_TYPE_NAME

public static final java.lang.String FILE_TYPE_NAME

See Also:

Constant Field Values

dumpWindow

public boolean dumpWindow

Constructor Detail

BaseFeatureSetFileHandler

public BaseFeatureSetFileHandler()

Method Detail

getFileTypeName

public java.lang.String getFileTypeName()

Return a string identifying this type of file

Returns:

setDumpWindow

public void setDumpWindow(boolean dumpWindow)

isXMLFile

public static boolean isXMLFile(java.io.File inputFile)
                         throws java.io.IOException

Throws:

java.io.IOException