org.fhcrc.cpl.toolbox.proteomics
Interface Scan

All Known Implementing Classes:

MSRun.MSScan

public interface Scan

User: mbellew Date: Feb 8, 2005 Time: 1:56:36 PM

Method Summary

float	getBasePeakIntensity()
float	getBasePeakMz()
int	getCentroided()
int	getChargeDeconvoluted()
float	getCollisionEnergy()
int	getDeisotoped()
double	getDoubleRetentionTime()
float	getEndMz()
float	getHighMz()
float	getIonisationEnergy()
float	getLowMz()
int	getMsLevel()
int	getNum()
int	getPeaksCount()
java.lang.String	getPolarity()
int	getPrecision()
int	getPrecursorCharge()
float	getPrecursorMz()
int	getPrecursorScanNum()
java.lang.String	getRetentionTime()
java.lang.String	getScanType()
float[][]	getSpectrum()
float	getStartMz()
float	getTotIonCurrent()

Method Detail

getSpectrum

float[][] getSpectrum()

getNum

int getNum()

getMsLevel

int getMsLevel()

getPeaksCount

int getPeaksCount()

getPolarity

java.lang.String getPolarity()

getScanType

java.lang.String getScanType()

getCentroided

int getCentroided()

getDeisotoped

int getDeisotoped()

getChargeDeconvoluted

int getChargeDeconvoluted()

getRetentionTime

java.lang.String getRetentionTime()

getStartMz

float getStartMz()

getEndMz

float getEndMz()

getLowMz

float getLowMz()

getHighMz

float getHighMz()

getBasePeakMz

float getBasePeakMz()

getBasePeakIntensity

float getBasePeakIntensity()

getTotIonCurrent

float getTotIonCurrent()

getPrecursorMz

float getPrecursorMz()

getPrecursorScanNum

int getPrecursorScanNum()

getPrecursorCharge

int getPrecursorCharge()

getCollisionEnergy

float getCollisionEnergy()

getIonisationEnergy

float getIonisationEnergy()

getPrecision

int getPrecision()

getDoubleRetentionTime

double getDoubleRetentionTime()