org.fhcrc.cpl.toolbox.gui.chart
Class PanelWithChart

java.lang.Object
  java.awt.Component
      java.awt.Container
          javax.swing.JComponent
              javax.swing.JPanel
                  org.fhcrc.cpl.toolbox.gui.chart.PanelWithChart

All Implemented Interfaces:

java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, javax.accessibility.Accessible

Direct Known Subclasses:

PanelWithBarChart, PanelWithBlindImageChart, PanelWithBoxAndWhiskerChart, PanelWithHeatMap, PanelWithHistogram, PanelWithLineChart, PanelWithPieChart, PanelWithScatterPlot

public class PanelWithChart
extends javax.swing.JPanel

Generic render-a-chart-in-a-panel class. Can export the chart data to .csv, .tsv files

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class javax.swing.JPanel

javax.swing.JPanel.AccessibleJPanel

Nested classes/interfaces inherited from class javax.swing.JComponent

javax.swing.JComponent.AccessibleJComponent

Nested classes/interfaces inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

protected org.jfree.chart.JFreeChart	_chart
protected org.jfree.chart.ChartPanel	_chartPanel
protected static org.apache.log4j.Logger	_log
protected org.jfree.chart.plot.Plot	_plot
static int	DEFAULT_HEIGHT_FOR_IMAGE_FILE
static int	DEFAULT_WIDTH_FOR_IMAGE_FILE

Fields inherited from class javax.swing.JComponent

accessibleContext, listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

PanelWithChart()

PanelWithChart(org.jfree.chart.JFreeChart chart)

PanelWithChart(org.jfree.chart.plot.Plot plot)

PanelWithChart(java.lang.String name)

Method Summary

void	addItemToPopupMenu(javax.swing.JMenuItem item)
void	addSeparatorToPopupMenu()
java.awt.image.BufferedImage	createImage()
java.awt.image.BufferedImage	createImage(int width, int height)
ChartDialog	displayDialog(java.lang.String title)
MultiChartDisplayPanel	displayInTab()
MultiChartDisplayPanel	displayInTab(java.lang.String newName)
org.jfree.chart.JFreeChart	getChart()
org.jfree.chart.ChartPanel	getChartPanel()
org.jfree.chart.plot.Plot	getPlot()
java.lang.String	getToolTipText(java.awt.event.MouseEvent e)
protected void	init(org.jfree.chart.JFreeChart chart)
protected void	init(org.jfree.chart.plot.Plot plot)
protected void	initPopupMenu() Add two new menu items to the popup menu, for saving to TSV and CSV files
boolean	isShowLegend()
protected void	saveChartDataToCSV(java.io.File outFile)
protected void	saveChartDataToFile(java.io.File outFile, java.lang.String delimiter)
protected void	saveChartDataToTSV(java.io.File outFile)
void	saveChartToImageFile(java.io.File outFile)
void	saveChartToImageFile(java.io.File outFile, int width, int height)
void	setPreferredSize(java.awt.Dimension newSize)
void	setShowLegend(boolean showLegend)

Methods inherited from class javax.swing.JPanel

getAccessibleContext, getUI, getUIClassID, paramString, setUI, updateUI

Methods inherited from class javax.swing.JComponent

addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusBackward, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

_log

protected static org.apache.log4j.Logger _log

_plot

protected org.jfree.chart.plot.Plot _plot

_chart

protected org.jfree.chart.JFreeChart _chart

_chartPanel

protected org.jfree.chart.ChartPanel _chartPanel

DEFAULT_WIDTH_FOR_IMAGE_FILE

public static final int DEFAULT_WIDTH_FOR_IMAGE_FILE

See Also:

Constant Field Values

DEFAULT_HEIGHT_FOR_IMAGE_FILE

public static final int DEFAULT_HEIGHT_FOR_IMAGE_FILE

See Also:

Constant Field Values

Constructor Detail

PanelWithChart

public PanelWithChart()

PanelWithChart

public PanelWithChart(java.lang.String name)

PanelWithChart

public PanelWithChart(org.jfree.chart.plot.Plot plot)

PanelWithChart

public PanelWithChart(org.jfree.chart.JFreeChart chart)

Method Detail

init

protected void init(org.jfree.chart.JFreeChart chart)

init

protected void init(org.jfree.chart.plot.Plot plot)

getChart

public org.jfree.chart.JFreeChart getChart()

getToolTipText

public java.lang.String getToolTipText(java.awt.event.MouseEvent e)

Overrides:

getToolTipText in class javax.swing.JComponent

getPlot

public org.jfree.chart.plot.Plot getPlot()

getChartPanel

public org.jfree.chart.ChartPanel getChartPanel()

addItemToPopupMenu

public void addItemToPopupMenu(javax.swing.JMenuItem item)

addSeparatorToPopupMenu

public void addSeparatorToPopupMenu()

initPopupMenu

protected void initPopupMenu()

Add two new menu items to the popup menu, for saving to TSV and CSV files

saveChartDataToCSV

protected void saveChartDataToCSV(java.io.File outFile)

saveChartDataToTSV

protected void saveChartDataToTSV(java.io.File outFile)

saveChartToImageFile

public void saveChartToImageFile(java.io.File outFile)
                          throws java.io.IOException

Throws:

java.io.IOException

saveChartToImageFile

public void saveChartToImageFile(java.io.File outFile,
                                 int width,
                                 int height)
                          throws java.io.IOException

Throws:

java.io.IOException

createImage

public java.awt.image.BufferedImage createImage(int width,
                                                int height)

Overrides:

createImage in class java.awt.Component

createImage

public java.awt.image.BufferedImage createImage()

saveChartDataToFile

protected void saveChartDataToFile(java.io.File outFile,
                                   java.lang.String delimiter)

setPreferredSize

public void setPreferredSize(java.awt.Dimension newSize)

Overrides:

setPreferredSize in class javax.swing.JComponent

isShowLegend

public boolean isShowLegend()

setShowLegend

public void setShowLegend(boolean showLegend)

displayDialog

public ChartDialog displayDialog(java.lang.String title)

displayInTab

public MultiChartDisplayPanel displayInTab()

displayInTab

public MultiChartDisplayPanel displayInTab(java.lang.String newName)