Package org.fhcrc.cpl.toolbox.commandline.arguments

Interface Summary
CommandLineArgumentDefinition This interface allows for communication between msInspect and individual CommandLineModules about required and optional arguments.
 

Class Summary
BaseArgumentDefinitionImpl  
BooleanArgumentDefinition  
DecimalArgumentDefinition  
DecimalListArgumentDefinition  
DeltaMassArgumentDefinition Treats an argument as a Delta Mass -- e.g., 0.1da, 5ppm.
DeltaMassArgumentDefinition.DeltaMassWithType  
DirectoryToReadArgumentDefinition  
DirectoryToWriteArgumentDefinition  
EnumeratedValuesArgumentDefinition Validates arguments against an explicitly enumerated list of String values.
FileArgumentDefinition  
FileArgumentDefinition.GUIFileChooserButtonListener  
FileToReadArgumentDefinition  
FileToReadListArgumentDefinition  
FileToWriteArgumentDefinition  
IntegerArgumentDefinition  
StringArgumentDefinition  
StringListArgumentDefinition A list of Strings separated by separatorString.
 

Exception Summary
ArgumentValidationException This class purely serves as a way to create a known type of Exception from a non-Exception event (like a String not conforming to a required format)
 



Fred Hutchinson Cancer Research Center